miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Citrus reticulata



ABOUT THIS RECORD

ID: MNEST000369
species: Citrus reticulata
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Citrus reticulata Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCTTCATCATCATCCACC

miRNA*
TGGTGGTCATGGAGTGATG

mismatches: 1
bulges: 2

View larger
pre-miRNA
GGGTAGAGCTGGTGGTGGTCATGGAGTGATGAGATTTTGTATCTGGCCGCTACAGACTCCGGAGATGCTACTGTGGACCACTACCTTCTTCCACCGCAAA
CTTATGATTTTCTAATAATTTTCATAATTTTAATTACAATATCACCATCATCTTCATCATCATCCACCTCATAAAAA


dot-bracket secondary structure
.(((...)))(((((((((.(((((((((((.(((.((((((((((............)))))..(((....(((((............))))).)))((
.((((((..((.....))...)))))).))....))))).)))..))))).)))))).)))).))))).........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-598: 0.0006
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;